- Haplotype sequence for each chromosome simulated from MaCS.
MAP*.txt:
- Map file corresponding to haplotypes sequence in CH*SNP.txt.
FounderGenotypes:
- Genotypes across chromosomes for each founder. The line number corresponds to the founder ID and the first column represents the row number of the two haplotypes that created the
genotype, followed by the genotype string.
Pheno_Pedigree:
- Used in constructing pedigree relationship matrix.
SNPFreq:
- Frequency of SNP across all chromosomes derived from MaCS.
